Msp_g23222


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g23222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00124250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AT1G74400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g098989 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22321 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06316.t1 Aspi01Gene06316 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35394.t1 Aspi01Gene35394 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g29934 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13534 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26851 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30253 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g48025 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g17588 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g01185 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12984 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41129 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60394 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g46045 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.06 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 37 94
No external refs found!