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  5. Msp_g23495

Msp_g23495


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g23495
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT2G44340 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
AT3G58000 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g015010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37551.t1 Aspi01Gene37551 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene46261.t1 Aspi01Gene46261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60648.t1 Aspi01Gene60648 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g40627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.07 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.04 OrthoFinder output from all 47 species
Ceric.19G048400.1 Ceric.19G048400 not classified & original description: pacid=50575656... 0.02 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.03 OrthoFinder output from all 47 species
Dac_g34502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23521 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g48139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g28880 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os06g41450.1 LOC_Os06g41450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430605g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g03890.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g16970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010042 No alias not classified & original description: CDS=1-846 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.02 OrthoFinder output from all 47 species
Spa_g03437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24720 No alias WRKY33-activaTing protein *(SIB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037581_P001 Zm00001e037581 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 51 72
No external refs found!