Aliases : PHL1
Description : GARP subgroup PHL transcription factor & original description: none
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g24340 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G04605 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057577 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057981 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g076598 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080178 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g081643 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11835 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09581 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22007 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01763 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04221 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15949 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40224 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009521 | No alias | not classified & original description: CDS=1-1092 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023545 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0089.g042590 | No alias | not classified & original description: CDS=1-831 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0124.g048483 | No alias | transcription factor *(CLAUSA) & original description: CDS=1-1350 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0401.g068282 | KAN4, ATS | KANADI-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16380 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G081900.1 | Ceric.14G081900 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G068700.1 | Ceric.28G068700 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G050900.1 | Ceric.32G050900 | transcription factor *(CLAUSA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G006800.1 | Ceric.33G006800 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g39820 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08284 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26213 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15807 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16004 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21970 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29468 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31337 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009589001 | KAN4, ATS | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011163001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032776001 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033515001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25991 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07170.1 | LOC_Os02g07170 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07770.1 | APL, WDY, LOC_Os02g07770 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g47890.1 | LOC_Os04g47890 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g40960.1 | LOC_Os05g40960 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g25799.1 | LOC_Os08g25799 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33050.1 | KAN, KAN1, LOC_Os08g33050 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g33750.1 | LOC_Os08g33750 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g02256 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21596 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21789 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g59713 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g01611 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05890 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05894 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_138039g0010 | KAN2 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_52379g0010 | No alias | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_8183372g0010 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g01560.1 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g08700.1 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25706 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00872 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03481 | KAN3 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19105 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19106 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15842 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26114 | PHL1 | transcription factor *(PHR1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06354 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05575 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06853 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29510 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g000821 | No alias | transcription factor *(CLAUSA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007778 | No alias | not classified & original description: CDS=1-762 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016001 | No alias | not classified & original description: CDS=379-1050 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13225 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo438638 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g006150.2.1 | Solyc03g006150 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g083340.3.1 | Solyc10g083340 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04247 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22319 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24824 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004125_P001 | Zm00001e004125 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005797_P001 | KAN4, ATS, Zm00001e005797 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009294_P001 | Zm00001e009294 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013626_P001 | Zm00001e013626 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022454_P001 | Zm00001e022454 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| No external refs found! |
