Msp_g24386


Description : not classified & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24386
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00212750 OFP2, ATOFP2,... RNA biosynthesis.transcriptional activation.OFP... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.04 OrthoFinder output from all 47 species
AT3G52550 No alias BEST Arabidopsis thaliana protein match is: ovate family... 0.02 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.04 OrthoFinder output from all 47 species
Aev_g34589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04698 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08829 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30223.t1 Aspi01Gene30223 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G010500.1 Ceric.18G010500 transcriptional co-regulator *(OFP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G044100.1 ATOFP5, OFP5,... transcriptional co-regulator *(OFP) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06311 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34037 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25347 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g29691 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g45620.1 LOC_Os02g45620 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06350.1 OFP11, atofp11,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g58820.1 ATOFP13, OFP13,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36990.1 ATOFP7, OFP7,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01190.1 OFP18, ATOFP18,... transcription factor (OFP) 0.05 OrthoFinder output from all 47 species
LOC_Os11g05770.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05780.1 LOC_Os11g05780 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06150.1 ATOFP13, OFP13,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06160.1 LOC_Os12g06160 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Len_g11797 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14168 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03475 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04957 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08652 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13520 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42815 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12951 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31234 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33357 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52266 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g072030.1.1 ATOFP5, OFP5,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Solyc06g082460.1.1 OFP4, ATOFP4,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Solyc11g006670.1.1 ATOFP13, OFP13,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
Spa_g11861 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48555 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g08846 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32323 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016408_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e025928_P001 Zm00001e025928 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e033910_P001 OFP14, ATOFP14,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e039401_P001 Zm00001e039401 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!