Msp_g24971


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24971

Target Alias Description ECC score Gene Family Method Actions
Adi_g002340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g038036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16779 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26341 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29706 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33579 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37414 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g51258 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68120 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.02 OrthoFinder output from all 47 species
Azfi_s0057.g034255 No alias not classified & original description: CDS=1-2025 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036583 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Azfi_s0115.g046284 No alias not classified & original description: CDS=76-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048776 No alias not classified & original description: CDS=1-1662 0.03 OrthoFinder output from all 47 species
Azfi_s0134.g049391 No alias not classified & original description: CDS=1-2007 0.02 OrthoFinder output from all 47 species
Azfi_s0195.g057240 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07635 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22254 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25283 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36371 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40077 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Len_g03351 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17755 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22918 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22924 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09779 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004070 CRR22 not classified & original description: CDS=1-2127 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.02 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Spa_g01950 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14609 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21211 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26791 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28099 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53370 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54636 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07718 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 143 190
IPR002885 Pentatricopeptide_repeat 41 87
IPR002885 Pentatricopeptide_repeat 245 291
IPR002885 Pentatricopeptide_repeat 16 36
IPR002885 Pentatricopeptide_repeat 117 140
No external refs found!