Msp_g25295


Description : not classified & original description: none


Gene families : OG0004243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25295

Target Alias Description ECC score Gene Family Method Actions
Als_g57018 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene15312.t1 Aspi01Gene15312 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33405.t1 Aspi01Gene33405 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0236.g059530 No alias not classified & original description: CDS=1-3180 0.01 OrthoFinder output from all 47 species
Cba_g17018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g38970.1 LOC_Os08g38970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g30380.1 LOC_Os09g30380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g09681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!