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  5. Msp_g26150

Msp_g26150


Description : not classified & original description: none


Gene families : OG0001274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26150
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00019700 ERD7,... Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.02 OrthoFinder output from all 47 species
AT3G51250 No alias Senescence/dehydration-associated protein-related 0.03 OrthoFinder output from all 47 species
Adi_g024818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g03179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21104 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04309 ERD7 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g12516 ERD7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G025800.1 Ceric.17G025800 not classified & original description: pacid=50618249... 0.05 OrthoFinder output from all 47 species
Ehy_g08353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g13840.2 ERD7, LOC_Os03g13840 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g24784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06984 ERD7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28690 ERD7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g008460.2.1 Solyc12g008460 Senescence/dehydration-associated protein At4g35985,... 0.04 OrthoFinder output from all 47 species
Spa_g02652 ERD7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14704 ERD7 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g19226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028202_P001 Zm00001e028202 Senescence/dehydration-associated protein At4g35985,... 0.02 OrthoFinder output from all 47 species
Zm00001e038603_P001 ERD7, Zm00001e038603 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009686 Senescence/spartin_C 241 408
No external refs found!