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  5. Msp_g26461

Msp_g26461


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26461
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Adi_g017266 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059699 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37047 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28944 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08352 No alias solute transporter *(AAAP) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g31436 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33694.t1 Aspi01Gene33694 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60271.t1 Aspi01Gene60271 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010042 No alias solute transporter *(AAAP) & original description: CDS=350-2020 0.03 OrthoFinder output from all 47 species
Ceric.04G055400.1 Ceric.04G055400 not classified & original description: pacid=50630661... 0.03 OrthoFinder output from all 47 species
Ceric.31G038800.1 Ceric.31G038800 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g43607 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11697 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033627001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_27840 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41420.1 LOC_Os01g41420 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Len_g30530 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21803 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_670490g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g14120.1 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Ore_g22994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25905 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25906 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29742 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04230 No alias solute transporter *(AAAP) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31949 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32905 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017489 No alias solute transporter *(AAAP) & original description: CDS=1-1299 0.03 OrthoFinder output from all 47 species
Solyc03g063040.4.1 Solyc03g063040 Amino acid transporter AVT1B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g52548 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28133 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039154_P004 Zm00001e039154 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 32 411
No external refs found!