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  5. Msp_g27019

Msp_g27019


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27019
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G66870 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020664001 PDCB5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g14140.1 LOC_Os01g14140 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58555.1 LOC_Os04g58555 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43690.1 LOC_Os05g43690 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g34660.1 PDCB5, LOC_Os06g34660 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071200.4.1 Solyc02g071200 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e021782_P001 Zm00001e021782 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 58 128
No external refs found!