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  5. Msp_g27479

Msp_g27479


Description : not classified & original description: none


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27479

Target Alias Description ECC score Gene Family Method Actions
AT3G18530 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G15830 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g10095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g18559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0212.g058228 No alias not classified & original description: CDS=352-660 0.02 OrthoFinder output from all 47 species
Azfi_s1072.g096902 No alias not classified & original description: CDS=95-1129 0.03 OrthoFinder output from all 47 species
Ceric.35G061200.1 Ceric.35G061200 not classified & original description: pacid=50581612... 0.03 OrthoFinder output from all 47 species
Dac_g08508 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g13657 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032493001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_18598 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g70560.1 LOC_Os01g70560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9956900g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g12677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55753 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g56200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028379_P001 Zm00001e028379 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 103 259
No external refs found!