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  5. Msp_g27907

Msp_g27907


Description : not classified & original description: none


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27907

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g22504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0436.g069942 No alias not classified & original description: CDS=1-840 0.03 OrthoFinder output from all 47 species
Ceric.09G062700.1 Ceric.09G062700 not classified & original description: pacid=50587605... 0.01 OrthoFinder output from all 47 species
Dcu_g20001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037874001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_19820 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g55480.1 LOC_Os02g55480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g10890.1 LOC_Os03g10890 Probable E3 ubiquitin-protein ligase RHY1A... 0.02 OrthoFinder output from all 47 species
LOC_Os11g37230.1 LOC_Os11g37230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g07226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007170.3.1 Solyc07g007170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g007180.4.1 Solyc07g007180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g10552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 129 172
No external refs found!