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  5. Msp_g28101

Msp_g28101


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28101

Target Alias Description ECC score Gene Family Method Actions
Aop_g08134 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17044 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36052 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40972 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g45851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18054 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g01185 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 402 424
IPR002885 Pentatricopeptide_repeat 98 121
IPR002885 Pentatricopeptide_repeat 123 169
IPR002885 Pentatricopeptide_repeat 225 270
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 326 373
No external refs found!