Msp_g28352


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28352

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
Als_g54832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23926 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23952 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67868 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29923 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.02G054200.1 Ceric.02G054200 not classified & original description: pacid=50585961... 0.04 OrthoFinder output from all 47 species
Ceric.21G080700.1 Ceric.21G080700 not classified & original description: pacid=50603857... 0.03 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.07 OrthoFinder output from all 47 species
Ceric.29G078100.1 Ceric.29G078100 not classified & original description: pacid=50625063... 0.05 OrthoFinder output from all 47 species
Dac_g33056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08824 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28101 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g32586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g23480 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05208 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g49230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61552 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo32263 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Spa_g01967 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16587 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21634 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22969 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23605 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g23607 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23972 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23976 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25057 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25989 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33028 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39519 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g40853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45689 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g53071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56737 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05541 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g32394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g35656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44232 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 377 424
IPR002885 Pentatricopeptide_repeat 579 626
IPR002885 Pentatricopeptide_repeat 276 324
IPR002885 Pentatricopeptide_repeat 175 221
IPR002885 Pentatricopeptide_repeat 480 527
IPR002885 Pentatricopeptide_repeat 75 96
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 647 678
No external refs found!