Msp_g28496


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28496

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Ala_g22769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30430 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23961 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os04g51350.1 LOC_Os04g51350 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g14364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g46652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 160 206
No external refs found!