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  5. Msp_g28749

Msp_g28749 (ATARFB1B, ARFB1B)


Aliases : ATARFB1B, ARFB1B

Description : ARF-GTPase *(ARFA) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28749

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00209290 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT2G15310 ATARFB1A, ARFB1A ADP-ribosylation factor B1A 0.05 OrthoFinder output from all 47 species
AT5G14670 ATARFA1B, ARFA1B ADP-ribosylation factor A1B 0.03 OrthoFinder output from all 47 species
Ala_g30565 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20796 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42739.t1 ATARFA1F,... ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g486250 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
GSVIVT01000224001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_01521 ATARFA1F, ARFA1F ARF-GTPase 0.04 OrthoFinder output from all 47 species
Len_g05681 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g36422 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g14560.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Mp3g13920.1 ATARFA1F, ARFA1F ARF-GTPase 0.03 OrthoFinder output from all 47 species
Pir_g13309 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Solyc02g092970.3.1 ATARF1, ARF1,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Spa_g11383 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 51 220
No external refs found!