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  5. Msp_g28920

Msp_g28920


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28920

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g04344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g36147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24164.t1 RD2, Aspi01Gene24164 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37518.t2 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G093900.1 Ceric.13G093900 not classified & original description: pacid=50635779... 0.05 OrthoFinder output from all 47 species
Ceric.1Z137200.1 Ceric.1Z137200 not classified & original description: pacid=50577014... 0.03 OrthoFinder output from all 47 species
GSVIVT01017725001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g06500.1 LOC_Os05g06500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28740.1 LOC_Os05g28740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g05144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g29442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 43 197
No external refs found!