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  5. Msp_g29580

Msp_g29580


Description : not classified & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29580
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00177420 CML43,... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00130840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G03290 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
AT4G12860 UNE14 EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
AT5G44460 CML43 calmodulin like 43 0.02 OrthoFinder output from all 47 species
Aev_g00406 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09654 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11342 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10817 TCH3, ATCAL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14961 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06375.t1 UNE14, Aspi01Gene06375 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34647.t1 CML42, Aspi01Gene34647 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34651.t1 CML42, Aspi01Gene34651 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34653.t1 CML42, Aspi01Gene34653 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34654.t1 CML42, Aspi01Gene34654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34656.t1 UNE14, Aspi01Gene34656 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34906.t1 UNE14, Aspi01Gene34906 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34907.t1 UNE14, Aspi01Gene34907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34910.t1 UNE14, Aspi01Gene34910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34915.t1 UNE14, Aspi01Gene34915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40816.t1 UNE14, Aspi01Gene40816 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40818.t1 UNE14, Aspi01Gene40818 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64179.t1 CML43, Aspi01Gene64179 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68790.t1 CML23, Aspi01Gene68790 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051443 UNE14 calcium sensor *(CML) & original description: CDS=1-462 0.01 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G109000.1 CML43, Ceric.04G109000 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.01 OrthoFinder output from all 47 species
Ceric.39G042000.1 UNE14, Ceric.39G042000 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g33458 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00701 CML43 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18813 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11295 CML39, CML37 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19176 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24054 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25457 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09082 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_13868 CML43 Probable calcium-binding protein CML43 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39380.1 AGD11, LOC_Os02g39380 Probable calcium-binding protein CML17 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os05g24780.1 CML42, LOC_Os05g24780 Probable calcium-binding protein CML21 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04890.1 CML42, LOC_Os08g04890 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17959 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22690 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10289213g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_269415g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_393053g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_66990g0010 UNE14 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7799814g0010 CML41 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g06060.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g18000.1 UNE14 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g20450.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Nbi_g44322 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07967 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15629 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43110 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05778 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20373 AGD11 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g058170.1.1 Solyc04g058170 Probable calcium-binding protein CML44 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g055880.1.1 AGD11, Solyc09g055880 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g009630.3.1 Solyc12g009630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g05451 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12245 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 31 58
IPR002048 EF_hand_dom 142 162
No external refs found!