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  5. Msp_g29975

Msp_g29975


Description : not classified & original description: none


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29975
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00101310 evm_27.TU.AmTr_v1... Putative non-specific lipid-transfer protein 14... 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00021420 LTP5,... Non-specific lipid-transfer protein A OS=Ricinus communis 0.02 OrthoFinder output from all 47 species
AMTR_s00162p00022020 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.04 OrthoFinder output from all 47 species
AT3G51590 LTP12 lipid transfer protein 12 0.02 OrthoFinder output from all 47 species
AT4G28395 ATA7, A7 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT4G28397 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT5G59310 LTP4 lipid transfer protein 4 0.04 OrthoFinder output from all 47 species
AT5G62065 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012608 No alias not classified & original description: CDS=9-443 0.06 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.06 OrthoFinder output from all 47 species
Ceric.02G006500.1 Ceric.02G006500 not classified & original description: pacid=50583964... 0.05 OrthoFinder output from all 47 species
Ceric.26G064000.1 Ceric.26G064000 not classified & original description: pacid=50599390... 0.03 OrthoFinder output from all 47 species
Dcu_g37886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29180 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g29763 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01010603001 No alias Putative non-specific lipid-transfer protein 14... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g40010.1 LOC_Os05g40010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g02300.1 LOC_Os12g02300 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02320.1 LOC_Os12g02320 Non-specific lipid-transfer protein 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os12g02330.2 LTP3, LOC_Os12g02330 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.02 OrthoFinder output from all 47 species
Len_g59234 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
MA_100155g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_110959g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18806g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_209545g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5482715g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g18569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06659 LTP6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g026090.4.1 Solyc03g026090 Putative non-specific lipid-transfer protein 14... 0.04 OrthoFinder output from all 47 species
Solyc06g005780.1.1 Solyc06g005780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc10g075118.1.1 Solyc10g075118 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc10g076200.3.1 Solyc10g076200 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Spa_g35078 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e026064_P001 Zm00001e026064 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040319_P005 Zm00001e040319 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 30 108
No external refs found!