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  5. Msp_g30335

Msp_g30335


Description : not classified & original description: none


Gene families : OG0000153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30335

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00180730 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
AT5G37990 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
AT5G38020 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
AT5G38100 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Ala_g14489 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32363 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ala_g32743 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Als_g51335 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aob_g08341 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aob_g21967 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32654.t1 IAMT1, Aspi01Gene32654 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01011637001 No alias Probable S-adenosylmethionine-dependent... 0.05 OrthoFinder output from all 47 species
GSVIVT01011638001 No alias Probable S-adenosylmethionine-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01018734001 JMT Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis 0.03 OrthoFinder output from all 47 species
GSVIVT01018906001 JMT Salicylate carboxymethyltransferase OS=Clarkia breweri 0.03 OrthoFinder output from all 47 species
GSVIVT01018913001 No alias Benzoate carboxyl methyltransferase OS=Antirrhinum majus 0.03 OrthoFinder output from all 47 species
GSVIVT01018916001 NAMT1 Benzoate carboxyl methyltransferase OS=Antirrhinum majus 0.03 OrthoFinder output from all 47 species
GSVIVT01030090001 NAMT1 Probable caffeine synthase 4 OS=Coffea arabica 0.04 OrthoFinder output from all 47 species
LOC_Os05g01140.1 LOC_Os05g01140 Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13560.1 ATBSMT1, BSMT1,... Anthranilate O-methyltransferase 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os06g21830.1 LOC_Os06g21830 Indole-3-acetate O-methyltransferase 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g15340.2 LOC_Os11g15340 Anthranilate O-methyltransferase 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Len_g28068 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g21785 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_10002583g0010 GAMT2 Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_113024g0010 No alias Probable caffeine synthase 2 OS=Camellia sinensis... 0.02 OrthoFinder output from all 47 species
MA_447149g0010 No alias Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_55258g0010 No alias Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.02 OrthoFinder output from all 47 species
Mp4g15450.1 IAMT1 Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g15220.1 GAMT2 Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g47449 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ore_g06294 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g22778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23150 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ore_g30585 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Pir_g07816 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g35875 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo24414 IAMT1 Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g005350.4.1 Solyc01g005350 no description available(sp|b2kpr3|lamt_catro : 270.0) &... 0.03 OrthoFinder output from all 47 species
Solyc01g080990.3.1 ATBSMT1, BSMT1,... Benzoate carboxyl methyltransferase OS=Antirrhinum majus... 0.02 OrthoFinder output from all 47 species
Solyc04g055253.1.1 JMT, Solyc04g055253 Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.03 OrthoFinder output from all 47 species
Solyc04g055255.1.1 JMT, Solyc04g055255 Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.02 OrthoFinder output from all 47 species
Zm00001e016786_P001 Zm00001e016786 Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.03 OrthoFinder output from all 47 species
Zm00001e024337_P001 JMT, Zm00001e024337 Anthranilate O-methyltransferase 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e024339_P001 JMT, Zm00001e024339 Anthranilate O-methyltransferase 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR005299 MeTrfase_7 3 133
No external refs found!