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  5. Msp_g30894

Msp_g30894


Description : not classified & original description: none


Gene families : OG0001844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30894
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g012313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49481 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g03214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10130.t1 Aspi01Gene10130 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59906.t1 Aspi01Gene59906 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59911.t1 Aspi01Gene59911 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59920.t1 Aspi01Gene59920 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59922.t1 Aspi01Gene59922 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59923.t1 Aspi01Gene59923 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59924.t1 Aspi01Gene59924 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59926.t1 Aspi01Gene59926 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34923 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37918 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g47988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06582 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_56062g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g04917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g14288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013785 No alias not classified & original description: CDS=174-989 0.03 OrthoFinder output from all 47 species
Tin_g09053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA Interproscan
BP GO:0009664 plant-type cell wall organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 235 291
IPR006706 Extensin_dom 135 192
No external refs found!