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  5. Msp_g30950

Msp_g30950 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30950

Target Alias Description ECC score Gene Family Method Actions
AT1G22780 RPS18A, PFL, PFL1 Ribosomal protein S13/S18 family 0.03 OrthoFinder output from all 47 species
AT1G34030 No alias Ribosomal protein S13/S18 family 0.03 OrthoFinder output from all 47 species
Adi_g110360 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0393.g067809 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.25G059000.1 RPS18A, PFL,... component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dac_g30011 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g07903 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp5g02820.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pir_g07726 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g17989 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_2090V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.01 OrthoFinder output from all 47 species
Ppi_g50278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35155 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo267619 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g078290.3.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g10602 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e011880_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0071821 FANCM-MHF complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 74 202
No external refs found!