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  5. Msp_g31086

Msp_g31086 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31086

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33246 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42997 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18372 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Spa_g09427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046848 E_motif 538 597
IPR002885 Pentatricopeptide_repeat 493 515
IPR002885 Pentatricopeptide_repeat 91 114
IPR002885 Pentatricopeptide_repeat 292 314
IPR002885 Pentatricopeptide_repeat 317 364
IPR002885 Pentatricopeptide_repeat 116 163
IPR002885 Pentatricopeptide_repeat 216 263
IPR002885 Pentatricopeptide_repeat 419 466
IPR002885 Pentatricopeptide_repeat 15 63
IPR032867 DYW_dom 630 721
No external refs found!