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  5. Msp_g31509

Msp_g31509 (IQD3)


Aliases : IQD3

Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31509
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 iqd17,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00053p00180370 IQD3,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G01110 IQD18 IQ-domain 18 0.03 OrthoFinder output from all 47 species
AT2G26410 Iqd4 IQ-domain 4 0.02 OrthoFinder output from all 47 species
AT4G00820 iqd17 IQ-domain 17 0.03 OrthoFinder output from all 47 species
AT4G10640 IQD16 IQ-domain 16 0.04 OrthoFinder output from all 47 species
AT5G03040 iqd2 IQ-domain 2 0.02 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18794 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23783 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33731 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37610 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28292.t1 IQD13, Aspi01Gene28292 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0190.g056933 IQD14 not classified & original description: CDS=42-1352 0.04 OrthoFinder output from all 47 species
Cba_g07595 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G023100.1 IQD3, Ceric.04G023100 not classified & original description: pacid=50631453... 0.04 OrthoFinder output from all 47 species
Ceric.14G012900.1 IQD6, Ceric.14G012900 not classified & original description: pacid=50633767... 0.04 OrthoFinder output from all 47 species
Ceric.24G079200.1 iqd2, Ceric.24G079200 not classified & original description: pacid=50628687... 0.06 OrthoFinder output from all 47 species
Ceric.34G011600.1 IQD3, Ceric.34G011600 not classified & original description: pacid=50623826... 0.05 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.07 OrthoFinder output from all 47 species
Dac_g08268 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16921 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24360 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g37658 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02611 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016320001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038630001 IQD18 No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g02250.1 iqd17, LOC_Os08g02250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04290 IQD3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g20587 IQD3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g39517 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08415 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36929 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_81306g0020 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g04298 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g33802 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20433 iqd2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27547 iqd17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29285 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12516 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001853 iqd2 not classified & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020615 IQD3 not classified & original description: CDS=342-1742 0.03 OrthoFinder output from all 47 species
Sam_g10433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo418826 iqd2 No description available 0.03 OrthoFinder output from all 47 species
Smo438938 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc08g083240.3.1 IQD18, Solyc08g083240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g007410.3.1 iqd2, Solyc09g007410 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07293 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09001 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13660 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021855_P001 iqd17, Zm00001e021855 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029506_P001 iqd2, Zm00001e029506 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 134 153
IPR025064 DUF4005 473 541
No external refs found!