Msp_g31881 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31881

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0049.g030849 No alias not classified & original description: CDS=1-2208 0.03 OrthoFinder output from all 47 species
Cba_g36996 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12801 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037769001 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Nbi_g26166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42862 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!