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  5. Msp_g32219

Msp_g32219


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04035 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00475.t1 LRX2, Aspi01Gene00475 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03958.t1 LRX2, Aspi01Gene03958 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene53230.t1 LRX2, Aspi01Gene53230 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28005 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03283 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 71 103
IPR001611 Leu-rich_rpt 280 338
No external refs found!