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  5. Msp_g32354

Msp_g32354 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00059p00213350 ADOF1, DOF1,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00055880 OBP4,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT1G47655 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.02 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024682 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16804 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06838 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11020 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22904 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14647 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14979 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011464 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s3725.g116702 DAG1 transcription factor *(DOF) & original description: CDS=243-665 0.02 OrthoFinder output from all 47 species
Cba_g00291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06470 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G043600.1 CDF2, Ceric.31G043600 transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07953 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01245 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03345 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14972 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26661 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30637 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_07177 CDF2 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g15959 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29714 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_7537g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Mp1g18540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g20658 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44058 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18526 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03743 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09266 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g077960.3.1 TMO6, Solyc02g077960 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g090220.3.1 OBP1, Solyc02g090220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g082840.3.1 DAG1, Solyc03g082840 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g075370.3.1 TMO6, Solyc06g075370 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc10g009360.4.1 DAG1, Solyc10g009360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023334_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 152 207
No external refs found!