Aliases : ATL43
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g32480 | |
| Cluster | HCCA: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00077p00070720 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00152p00054630 | RHA2A,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G04360 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G33480 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G35330 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G49230 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G53820 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G27940 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35000 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G16720 | ATL2, TL2 | TOXICOS EN LEVADURA 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G19140 | DNF | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G00305 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G24015 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G07040 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g044433 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g048849 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g060420 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g118032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01755 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04035 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05022 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene00937.t1 | BRH1, Aspi01Gene00937 | E3 ubiquitin ligase *(BRH) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene11303.t1 | ATL5, Aspi01Gene11303 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene28289.t1 | Aspi01Gene28289 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene56880.t1 | Aspi01Gene56880 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014251 | ATL2, TL2 | not classified & original description: CDS=1-1224 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044133 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g32773 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G113700.1 | Ceric.01G113700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G066200.1 | Ceric.03G066200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G024700.1 | Ceric.05G024700 | not classified & original description: pacid=50577851... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G057400.1 | Ceric.07G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G015900.1 | Ceric.12G015900 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G061400.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G062000.1 | Ceric.22G062000 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G034400.1 | Ceric.31G034400 | not classified & original description: pacid=50574216... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G012100.1 | Ceric.33G012100 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G005300.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g00774 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g00990 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g03665 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12448 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g26130 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009098001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02533 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g15020.1 | LOC_Os02g15020 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g46600.1 | LOC_Os02g46600 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g05560.1 | LOC_Os03g05560 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44636.1 | LOC_Os03g44636 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g57410.1 | LOC_Os03g57410 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g15170.1 | ATL63, TL63,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g45060.1 | LOC_Os05g45060 | RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g08820.1 | LOC_Os06g08820 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g11450.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g16060.1 | LOC_Os06g16060 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g34360.1 | LOC_Os06g34360 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g53832 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57067 | ATL4H | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_129306g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_17390g0010 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| MA_31736g0010 | BRH1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09561 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05230 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07839 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g00818 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28091 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43484 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g23024 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g46507 | BRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g09745 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g18570 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12572 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g43947 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015449 | No alias | not classified & original description: CDS=1-711 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023284 | No alias | not classified & original description: CDS=1-567 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0190.g025249 | No alias | not classified & original description: CDS=1-534 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g06931 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g123680.1.1 | Solyc03g123680 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g010175.1.1 | RHA2A, Solyc05g010175 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g005320.1.1 | Solyc11g005320 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g087860.3.1 | ATL6, Solyc12g087860 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01502 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17415 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008560_P001 | RHA2A, Zm00001e008560 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015445_P001 | BRH1, Zm00001e015445 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015796_P001 | Zm00001e015796 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018028_P001 | Zm00001e018028 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020958_P001 | Zm00001e020958 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029032_P001 | Zm00001e029032 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030930_P001 | ATL3, Zm00001e030930 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 168 | 211 |
| No external refs found! |
