Msp_g33323


Description : not classified & original description: none


Gene families : OG0003489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33323

Target Alias Description ECC score Gene Family Method Actions
AT1G66810 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene10513.t1 Aspi01Gene10513 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011819001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01022264001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030969001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
Pir_g54698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g008670.3.1 Solyc05g008670 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 235 256
IPR000571 Znf_CCCH 185 210
IPR000571 Znf_CCCH 94 119
No external refs found!