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  5. Msp_g33481

Msp_g33481


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33481
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT5G40010 AATP1 AAA-ATPase 1 0.02 OrthoFinder output from all 47 species
Adi_g031480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene06431.t1 Aspi01Gene06431 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0349.g066535 No alias not classified & original description: CDS=1-1455 0.03 OrthoFinder output from all 47 species
Ceric.01G052300.1 Ceric.01G052300 not classified & original description: pacid=50592955... 0.03 OrthoFinder output from all 47 species
Dac_g32226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018890001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g40140.1 LOC_Os01g40140 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g42030.1 BCS1, LOC_Os01g42030 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38800.1 LOC_Os03g38800 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58790.1 LOC_Os03g58790 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48240.1 LOC_Os06g48240 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48250.1 LOC_Os06g48250 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g15160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_296237g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_296237g0020 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_354707g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_604139g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo422466 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g34871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008810_P001 AATP1, Zm00001e008810 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e011416_P001 Zm00001e011416 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e033043_P001 Zm00001e033043 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e038158_P001 AATP1, Zm00001e038158 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 1 65
IPR003959 ATPase_AAA_core 193 333
No external refs found!