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  5. Msp_g33818

Msp_g33818


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33818
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023764 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080993 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29210 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023878 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044768 EMB2758 not classified & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.03 OrthoFinder output from all 47 species
Cba_g03313 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16658 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.04 OrthoFinder output from all 47 species
Ceric.04G040300.1 CRR22, Ceric.04G040300 not classified & original description: pacid=50630674... 0.05 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.21G051400.1 VAC1, ECB2,... not classified & original description: pacid=50603510... 0.04 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.03 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.03 OrthoFinder output from all 47 species
Ceric.28G059600.1 OTP84, Ceric.28G059600 not classified & original description: pacid=50569965... 0.04 OrthoFinder output from all 47 species
Dac_g21408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05694 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16666 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28401 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.05 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Gb_29872 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_30146 CRR22 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_38158 CRR2 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_109134g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46357 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46657 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001819 OTP86 not classified & original description: CDS=1-3381 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003208 No alias monogalactosyldiacylglycerol lipase *(HIL1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004577 No alias not classified & original description: CDS=1-1743 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007167 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-3162 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008098 CRR22 not classified & original description: CDS=1-2784 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015808 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017091 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018780 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019669 OTP84 not classified & original description: CDS=1-1971 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025782 No alias not classified & original description: CDS=1-2394 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025786 No alias not classified & original description: CDS=42-3869 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.04 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo47998 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11066 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 221 268
IPR002885 Pentatricopeptide_repeat 297 319
IPR002885 Pentatricopeptide_repeat 195 217
IPR002885 Pentatricopeptide_repeat 93 115
IPR002885 Pentatricopeptide_repeat 16 64
IPR002885 Pentatricopeptide_repeat 119 165
No external refs found!