Msp_g34234


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00223290 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g003169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21643 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06724 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06902 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25462 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31602 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g39440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11003 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.07 OrthoFinder output from all 47 species
Cba_g03800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14047 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34736 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g38142 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g43844 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44166 OTP85 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g47996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g58788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g76054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76759 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05114 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g05618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35942 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43182 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08653 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08940 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17266 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37078 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44865 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05041 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g08485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25859 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_82595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45751 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45873 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40762 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03644 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23470 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 225
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
No external refs found!