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  5. Msp_g34523

Msp_g34523


Description : not classified & original description: none


Gene families : OG0003115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34523

Target Alias Description ECC score Gene Family Method Actions
Ala_g15189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038874 No alias not classified & original description: CDS=241-1326 0.03 OrthoFinder output from all 47 species
Ceric.28G021800.1 Ceric.28G021800 not classified & original description: pacid=50570326... 0.03 OrthoFinder output from all 47 species
Ceric.28G049500.1 Ceric.28G049500 not classified & original description: pacid=50570962... 0.02 OrthoFinder output from all 47 species
Cre02.g105200 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre05.g235700 No alias No description available 0.07 OrthoFinder output from all 47 species
Ehy_g23159 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_31133 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g23668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21791 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g03914 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g042700.4.1 Solyc09g042700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 203 234
IPR008138 SapB_2 284 317
IPR007856 SapB_1 162 198
No external refs found!