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  5. Msp_g36477

Msp_g36477


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g36477
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
Adi_g015490 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57903 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G042000.1 Ceric.20G042000 CAPE precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g13857 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19657 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54570.1 LOC_Os02g54570 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03279.1 LOC_Os07g03279 Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03288.1 LOC_Os07g03288 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03377.1 LOC_Os07g03377 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03458.1 LOC_Os07g03458 Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03620.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03690.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os12g43700.1 LOC_Os12g43700 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
MA_102795g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
MA_501572g0010 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Mp3g14110.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g14130.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Ppi_g45456 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.02 OrthoFinder output from all 47 species
Smo101466 ATPR1, PR1, PR 1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Solyc10g048040.1.1 Solyc10g048040 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc10g048080.3.1 PRB1, ATPRB1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g32203 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36983 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 33 156
No external refs found!