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  5. Msp_g36822

Msp_g36822


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g36822
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AT1G49230 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G53010 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G18670 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09130 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G15975 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17245 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G41440 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g05267 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g30636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g19646 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g24368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g48822 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g60107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00937.t1 BRH1, Aspi01Gene00937 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010071 No alias not classified & original description: CDS=1-183 0.04 OrthoFinder output from all 47 species
Ceric.01G091800.1 Ceric.01G091800 not classified & original description: pacid=50591615... 0.03 OrthoFinder output from all 47 species
Ceric.05G094800.1 ATL4H, Ceric.05G094800 not classified & original description: pacid=50578003... 0.03 OrthoFinder output from all 47 species
Ceric.06G080900.1 Ceric.06G080900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.09G083500.1 Ceric.09G083500 not classified & original description: pacid=50586830... 0.04 OrthoFinder output from all 47 species
Ceric.10G008300.1 Ceric.10G008300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.03 OrthoFinder output from all 47 species
Ceric.38G004700.1 Ceric.38G004700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g01390 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g03607 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g07458 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g34610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01132 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06688 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g27581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29562 ATL2, TL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_00010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05381 No alias RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_33184 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g15060.1 LOC_Os02g15060 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g46100.1 LOC_Os02g46100 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g15170.1 ATL63, TL63,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os05g29150.1 ATL8, LOC_Os05g29150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29676.1 LOC_Os05g29676 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g34560.1 ATL43, LOC_Os06g34560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42530.1 RHA3B, LOC_Os12g42530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g44328 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10432668g0010 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_177673g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_223841g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_462422g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_51630g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_61738g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_78702g0010 ATL8 RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8362328g0010 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.04 OrthoFinder output from all 47 species
MA_96368g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g39033 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g42863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43484 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g15928 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g44046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50189 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g02738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46048 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g61044 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008676 ATL4H not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023284 No alias not classified & original description: CDS=1-567 0.03 OrthoFinder output from all 47 species
Sam_g01312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo423895 ATL43 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc02g083660.1.1 Solyc02g083660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g114190.1.1 Solyc03g114190 RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g009780.1.1 Solyc04g009780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g007230.2.1 ATL2, TL2, Solyc06g007230 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc06g150136.1.1 Solyc06g150136 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc10g008080.3.1 Solyc10g008080 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc10g081780.3.1 Solyc10g081780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g17415 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g29981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03901 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g38097 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e007103_P001 Zm00001e007103 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007957_P001 ATL6, Zm00001e007957 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014286_P001 Zm00001e014286 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015259_P001 Zm00001e015259 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016092_P001 Zm00001e016092 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e022175_P001 Zm00001e022175 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034025_P001 RHA3A, Zm00001e034025 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 97 141
No external refs found!