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  5. Msp_g37562

Msp_g37562 (SPL8)


Aliases : SPL8

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g37562

Target Alias Description ECC score Gene Family Method Actions
Ala_g10909 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17545 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055767 SPL3 SBP-type transcription factor & original description: CDS=94-1491 0.03 OrthoFinder output from all 47 species
Dac_g14571 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003836001 SPL12 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Ore_g32350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g090730.3.1 SPL8, Solyc01g090730 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc10g078700.3.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 261 334
No external refs found!