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  5. Msp_g38789

Msp_g38789


Description : component *(eS24) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38789

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00221450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
AT3G04920 No alias Ribosomal protein S24e family protein 0.03 OrthoFinder output from all 47 species
AT5G28060 No alias Ribosomal protein S24e family protein 0.04 OrthoFinder output from all 47 species
Ala_g15047 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g35275 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aob_g05584 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g12029 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Azfi_s0103.g044621 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Ceric.04G017300.1 Ceric.04G017300 component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.39G012600.1 Ceric.39G012600 component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Dcu_g25341 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g20443 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
GSVIVT01021860001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g52490.1 LOC_Os01g52490 component RPS24 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os02g13530.1 LOC_Os02g13530 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os06g36160.1 LOC_Os06g36160 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g49108 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g31874 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_119841g0010 No alias component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g07394 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Msp_g37926 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g23191 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g22288 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g32358 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pir_g12348 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Pir_g54928 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003282 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g09368 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12713 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g31840 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g45993 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g50017 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Solyc01g097870.3.1 Solyc01g097870 component RPS24 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc06g084230.3.1 Solyc06g084230 component RPS24 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g10585 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g19361 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Tin_g29759 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Zm00001e014422_P002 Zm00001e014422 component RPS24 of SSU proteome 0.06 OrthoFinder output from all 47 species
Zm00001e028203_P001 Zm00001e028203 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e030668_P001 Zm00001e030668 component RPS24 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 70 148
No external refs found!