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  5. Msp_g39132

Msp_g39132


Description : component *(eL30) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39132
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT3G18740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Aob_g13899 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g28716 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g17201 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g06686 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g29653 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g19759 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01022191001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g16890.1 LOC_Os01g16890 component RPL30 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c16_10400V3.1 Pp3c16_10400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
Pp3c4_15480V3.1 Pp3c4_15480 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g07992 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g45700 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41445 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g41910 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Tin_g35788 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 13 105
No external refs found!