Msp_g39560


Description : not classified & original description: none


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00207060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.04 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.04 OrthoFinder output from all 47 species
AT3G61280 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
Aspi01Gene66551.t1 Aspi01Gene66551 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G033100.1 Ceric.22G033100 not classified & original description: pacid=50614921... 0.03 OrthoFinder output from all 47 species
Dcu_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019779001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g01150.1 LOC_Os08g01150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_912717g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo419091 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g24654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040430_P002 Zm00001e040430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 1 270
No external refs found!