Msp_g40955

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g40955

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00264370	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
AT1G69940	ATPPME1, PPME1	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
Ceric.14G017300.1	Ceric.14G017300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g51672	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12393	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428207g0020	No alias	Probable pectinesterase 53 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_7274893g0010	No alias	Putative pectinesterase 11 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Ore_g42824	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g079180.4.1	Solyc01g079180	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Zm00001e035522_P001	QRT1, Zm00001e035522	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	81	367

External Links

No external refs found!