1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g41241

Msp_g41241 (NCED3, SIS7, STO1, ATNCED3)


Aliases : NCED3, SIS7, STO1, ATNCED3

Description : not classified & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g41241
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.02 OrthoFinder output from all 47 species
Cba_g27810 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.23G048000.1 ATNCED5, NCED5,... not classified & original description: pacid=50610607... 0.04 OrthoFinder output from all 47 species
Ehy_g19766 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47510.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Mp2g07800.1 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.02 OrthoFinder output from all 47 species
Nbi_g24334 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Sam_g10352 No alias EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Sam_g37014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 3 143
No external refs found!