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  5. Msp_g41397

Msp_g41397


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g41397
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g066950 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34269 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21844 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28677 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g42618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Len_g05368 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015487 No alias not classified & original description: CDS=260-3676 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023491 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 303 325
IPR002885 Pentatricopeptide_repeat 404 429
No external refs found!