Description : pectin methylesterase & original description: none
Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g42978 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00085870 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00140p00035900 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g046688 | No alias | pectin methylesterase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12101 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03729 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G019100.1 | Ceric.06G019100 | pectin methylesterase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z106800.1 | Ceric.1Z106800 | pectin methylesterase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11068 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g28954 | No alias | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23209 | No alias | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Len_g07516 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_18312g0010 | ATPE11, PE11 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| MA_6149868g0010 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g109740.3.1 | ATPE11, PE11,... | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47305 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g54582 | No alias | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029074_P001 | Zm00001e029074 | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 167 | 458 |
| No external refs found! |
