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  5. Msp_g43811

Msp_g43811 (SNF7.2, VPS32)


Aliases : SNF7.2, VPS32

Description : component *(VPS32/SNF7) of ESCRT-III complex & original description: none


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43811
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Als_g37735 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014906 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g00577 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G014400.1 SNF7.1, Ceric.32G014400 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G059500.1 SNF7.2, VPS32,... component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Cre06.g282200 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40620.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
LOC_Os09g09480.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g02830.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.01 OrthoFinder output from all 47 species
Mp6g10770.1 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Nbi_g03437 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007126 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Solyc08g065900.4.1 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Spa_g04315 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e020702_P001 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Zm00001e037444_P001 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 89 252
No external refs found!