1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g43841

Msp_g43841


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43841

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00222920 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
AMTR_s00032p00029450 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g20770... 0.06 OrthoFinder output from all 47 species
AMTR_s00032p00177680 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Aob_g27604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
MA_68707g0010 No alias RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g04242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23154 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13476 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 511 558
IPR002885 Pentatricopeptide_repeat 613 660
IPR002885 Pentatricopeptide_repeat 208 257
IPR002885 Pentatricopeptide_repeat 309 357
IPR002885 Pentatricopeptide_repeat 411 455
IPR002885 Pentatricopeptide_repeat 43 89
IPR002885 Pentatricopeptide_repeat 111 139
IPR002885 Pentatricopeptide_repeat 284 306
IPR002885 Pentatricopeptide_repeat 385 409
No external refs found!