Msp_g45686


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g45686

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g46737 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37181 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044571 No alias not classified & original description: CDS=1-2829 0.06 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.04 OrthoFinder output from all 47 species
Ceric.26G072000.1 Ceric.26G072000 not classified & original description: pacid=50599752... 0.05 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26260 CRR22 RNA editing factor (MEF7) 0.05 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37643 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40709 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo133320 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo96304 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23253 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27970 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 228 272
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 200 221
IPR002885 Pentatricopeptide_repeat 97 120
No external refs found!