Msp_g45694


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g45694

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
Adi_g005487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034865 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053729 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10029 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39950 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G017400.1 Ceric.29G017400 not classified & original description: pacid=50625928... 0.04 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29139 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g44991 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16794 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03469 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Len_g03770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36740 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19402 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49579 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51837 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63777 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09062 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009070 No alias not classified & original description: CDS=1-2223 0.05 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23959 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 607 631
IPR002885 Pentatricopeptide_repeat 200 220
IPR002885 Pentatricopeptide_repeat 506 527
IPR002885 Pentatricopeptide_repeat 404 429
IPR002885 Pentatricopeptide_repeat 430 476
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 532 578
IPR002885 Pentatricopeptide_repeat 632 680
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 124 170
No external refs found!