Msp_g46080


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g46080

Target Alias Description ECC score Gene Family Method Actions
Adi_g002042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005790 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082334 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04126 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05235 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09302 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16505 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23660 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g25108 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28687 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29706 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30401 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33385 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g33599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67579 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67866 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68120 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0042.g026834 No alias not classified & original description: CDS=1-1929 0.05 OrthoFinder output from all 47 species
Azfi_s0389.g067649 OTP84 not classified & original description: CDS=1-2388 0.05 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G051800.1 VAC1, ECB2,... not classified & original description: pacid=50639747... 0.04 OrthoFinder output from all 47 species
Ceric.16G050700.1 Ceric.16G050700 not classified & original description: pacid=50589143... 0.04 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.04 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.03 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.04 OrthoFinder output from all 47 species
Ceric.26G066800.1 EMB2758, Ceric.26G066800 not classified & original description: pacid=50599100... 0.03 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05561 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24892 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.03 OrthoFinder output from all 47 species
Len_g02877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09438 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_117676g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_465411g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Msp_g03563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15606 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57366 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g54649 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002995 DOT4 not classified & original description: CDS=1-2349 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009486 No alias not classified & original description: CDS=1-3465 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013942 No alias not classified & original description: CDS=1-3669 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021987 No alias not classified & original description: CDS=1-1590 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g082870.1.1 Solyc04g082870 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
Spa_g01739 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05893 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43987 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 68 115
IPR002885 Pentatricopeptide_repeat 171 217
IPR002885 Pentatricopeptide_repeat 272 315
IPR002885 Pentatricopeptide_repeat 145 167
No external refs found!