Msp_g47291


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
AMTR_s00126p00080460 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Adi_g002608 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21643 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37757 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g16414 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07029 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31602 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g39440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11003 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g16781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34782.t1 Aspi01Gene34782 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39079.t1 Aspi01Gene39079 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.08 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.06 OrthoFinder output from all 47 species
Azfi_s0092.g042995 No alias not classified & original description: CDS=1-2949 0.05 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.05 OrthoFinder output from all 47 species
Azfi_s2054.g108918 CRR22 not classified & original description: CDS=1-2412 0.05 OrthoFinder output from all 47 species
Cba_g02644 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29842 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g43844 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g44166 OTP85 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g47996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g58788 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g76759 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.08 OrthoFinder output from all 47 species
Ceric.29G024800.1 Ceric.29G024800 not classified & original description: pacid=50625545... 0.05 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35942 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08940 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37078 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g39176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46630 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g48675 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15722 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g24358 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g24658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g01524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08485 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g25859 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_139163g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_210823g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_55967g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34246 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27955 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40762 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23470 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006762 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.03 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo32263 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc03g119120.3.1 Solyc03g119120 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc04g064750.2.1 Solyc04g064750 RNA editing factor (MEF12). serine carboxypeptidase 0.03 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
Solyc04g082870.1.1 Solyc04g082870 Pentatricopeptide repeat-containing protein At1g25360... 0.05 OrthoFinder output from all 47 species
Spa_g06116 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16324 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17180 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17413 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 372
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 199 220
IPR002885 Pentatricopeptide_repeat 97 121
IPR002885 Pentatricopeptide_repeat 403 424
No external refs found!