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  5. Msp_g47539

Msp_g47539 (J20)


Aliases : J20

Description : not classified & original description: none


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47539
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00168770 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G13830 J20 DNAJ-like 20 0.03 OrthoFinder output from all 47 species
AT4G36040 No alias Chaperone DnaJ-domain superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g010204 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00729 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12797 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021014001 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_01235 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_09518 ATDJC39, ARL2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22868 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g01160.1 J20, LOC_Os01g01160 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g46222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426451g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_19658g0010 ATDJC39, ARL2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_241669g0010 ERDJ3B, ATERDJ3B Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g20430.1 J20 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g23700.1 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g08210.1 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g42658 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44965 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00317 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00356 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo9299 ATDJC39, ARL2 No description available 0.02 OrthoFinder output from all 47 species
Solyc07g065960.1.1 Solyc07g065960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g092260.4.1 J20, Solyc09g092260 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g26345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017189_P001 J20, Zm00001e017189 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 111 170
No external refs found!