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  5. Msp_g48633

Msp_g48633


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48633

Target Alias Description ECC score Gene Family Method Actions
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07004 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31466.t1 Aspi01Gene31466 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene52145.t1 CRR22, Aspi01Gene52145 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65846.t1 OSB3, Aspi01Gene65846 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71026.t1 Aspi01Gene71026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18331 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G112800.1 Ceric.04G112800 not classified & original description: pacid=50632583... 0.05 OrthoFinder output from all 47 species
Ceric.06G022800.1 Ceric.06G022800 not classified & original description: pacid=50620328... 0.03 OrthoFinder output from all 47 species
Ceric.08G040300.1 Ceric.08G040300 not classified & original description: pacid=50638085... 0.05 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Dac_g30166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08279 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.05 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18975 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04624 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008323 No alias not classified & original description: CDS=476-3628 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009138 No alias component *(NRPC16/RPC34) of TFIIIe transcription factor... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014482 No alias not classified & original description: CDS=1-1119 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025786 No alias not classified & original description: CDS=42-3869 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.02 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Spa_g13686 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53483 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 479 509
IPR002885 Pentatricopeptide_repeat 552 576
IPR002885 Pentatricopeptide_repeat 46 72
IPR002885 Pentatricopeptide_repeat 74 98
IPR002885 Pentatricopeptide_repeat 451 477
IPR002885 Pentatricopeptide_repeat 375 423
IPR002885 Pentatricopeptide_repeat 578 625
IPR002885 Pentatricopeptide_repeat 274 323
IPR002885 Pentatricopeptide_repeat 173 221
No external refs found!